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UVA Research Computing

Research Computing

Creating innovative solutions for researchers

epihet

epihet

RC is working with researchers in the Center for Public Health Genomics to write an R package to calculate Relative Proportion of Sites with Intermediate Methylation (RPIM) scores, which represent the epigenetic heterogeneity in a bisulfite sequencing sample.

https://github.com/databio/epihet

PI: Nathan Sheffield (Center for Public Health Genomics)


Updated May 3, 2018 |  projects    bioinformatics, cphg, r

Projects

  1. - Active Galactic Nuclei
  2. - BART Web
  3. - Bradycardia and Desaturation Events in Infants
  4. - Cardiovascular Genomics
  5. - Center for Diabetes Technology PriMed
  6. - COVID-19 Surveillance Dashboard
  7. - Economic Market Behavior
  8. - epihet
  9. - Fluid Dynamics and Reef Health
  10. - Fluorescence Lifetime Imaging Microscopy in Cancer Research
  11. - Functional Connectome Fingerprinting
  12. - Heart Rate Ranges in Neonates
  13. - LOLAweb
  14. - Microbiome Analysis of Hospital Sink Drains
  15. - PHACTR1 and Smooth Muscle Cell Behavior
  16. - Predicting ER Triage Levels with Machine Learning
  17. - Predicting Injury Severity
  18. - Projects
  19. - Pulse Laser Irradiation and Surface Morphology
  20. - Quantifying Calcium Oscillations
  21. - Quantifying Cerebral Cortex Regions
  22. - Refgenie: A Reference Genome Resource Manager
  23. - Secure Computing for Surgical Research
  24. - simpleCache
  25. - Sonomicrometry Signal Classification
  26. - Tracking Bug Movements
  27. - Transcription factor-chromatin Binding Dynamics

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