We are pleased to announce that AlphaFold is now available on Rivanna! Here are some of our user’s first few protein structure prediction calculations on Rivanna.
Simple ZFc protein: Similar results for AlphaFold (brown) and I-TASSER (blue). (This figure was created with the RCSB Pairwise Structure Alignment tool.)
146PduD-linker-ZFc protein: AlphaFold’s (left) superior ability to predict secondary structure, a β-sheet in its green-yellow region, whereas I-TASSER (right) is not sufficiently refined to feature any β-strands. (This figure was created with NGL Viewer.)
(Credits: David Bass and Prof. Keith Kozminski, Department of Biology)
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