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Workshops
UVA Research Computing provides training opportunities covering a variety of data analysis, basic programming and computational topics. All of the classes listed below are taught by experts and are freely available to UVa faculty, staff and students.
Upcoming Workshops DATE WORKSHOP INSTRUCTOR Oct 12, 2023
High Performance Computing from your Web BrowserPaul Orndorff Oct 19, 2023
High Performance Computing from a Terminal WindowAhmad Sheikhzada, Gladys Andino Oct 23, 2023
Using Containers on RivannaRuoshi Sun Oct 26, 2023
High Performance Computing Best PracticesEd Hall, Ahmad Sheikhzada, Paul Orndorff Oct 30, 2023
education,
workshops
bioinformatics,
containers,
HPC,
image processing,
Ivy,
Matlab,
programming,
Python,
R,
Rivanna,
Shiny
LOLAweb
The past few years have seen an explosion of interest in understanding the role of regulatory DNA. This interest has driven large-scale production of functional genomics data resources and analytical methods. One popular analysis is to test for enrichment of overlaps between a query set of genomic regions and a database of region sets. In this way, annotations from external data sources can be easily connected to new genomic data.
SOM Research Computing is working with faculty in the UVA Center for Public Health Genomics to implement LOLAweb, an online tool for performing genomic locus overlap annotations and analyses. This project, written in the statistical programming language R, allows users to specify region set data in BED format for automated enrichment analysis.
