We are pleased to announce that AlphaFold is now available on Rivanna! Here are some of our user’s first few protein structure prediction calculations on Rivanna.
Simple ZFc protein: Similar results for AlphaFold (brown) and I-TASSER (blue). (This figure was created with the RCSB Pairwise Structure Alignment tool.)
146PduD-linker-ZFc protein: AlphaFold’s (left) superior ability to predict secondary structure, a β-sheet in its green-yellow region, whereas I-TASSER (right) is not sufficiently refined to feature any β-strands. (This figure was created with NGL Viewer.)
(Credits: David Bass and Prof. Keith Kozminski, Department of Biology)
FAQ What is AlphaFold?
AlphaFold is an AI for protein structure prediction developed by Google DeepMind.Read more →
Rivanna will be down for maintenance on Wednesday, December 16 & Thursday, December 17, beginning at 6 a.m. on December 16.
You may continue to submit jobs until the maintenance period begins, but if the system determines your job will not have time to finish, it will not start until Rivanna is returned to service.
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